2.8 |
Class: C3H zinc finger factors (C3H), Alignment |
Aligned C3H sequences (Class 2.8): |
Alignment of the whole DNA-binding domains, each comprising two repeats: |
ICKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKFYV-QGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHAPL ZC3H8
ICKYFVEG-RCTWGDHCNFSHDIELPKKRELCKFYI-TGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPL ZC3H4
ICKYFLEG-RCIKGDQCKFDHDAELEKRKEICKFYL-QGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHDDL ZC3H6
PCPFFLEG-KCRFKENCRFSHGQV------------------------------------------------------ ZGPAT
------------------------------MCRDLRQQGGCPRGTNCTFAHSQE RC3H2
YCSYFLKNMQCPKPD-CMYLHELG------------------------------------------------------ CNOT4
Alignment of the individual repeats: |
ICKYFLER-KCIKGDQCKFDHDAE ZC3H8(1)
MCKFYVQG-YCTRGENCLYLHNEY ZC3H8(2)
PCKFYHTGTKCYQGEYCKFSHAPL ZC3H8(3)
ICKYFVEG-RCTWGDHCNFSHDIE ZC3H4(1)
LCKFYITG-FCARAENCPYMHGDF ZC3H4(2)
PCKLYHTTGNCINGDDCMFSHDPL ZC3H4(3)
ICKYFLEG-RCIKGDQCKFDHDAE ZC3H6(1)
ICKFYLQG-YCTKGENCIYMHNEF ZC3H6(2)
PCKFYHSGAKCYQGDNCKFSHDDL ZC3H6(3)
PCPFFLEG-KCRFKENCRFSHGQV ZGPAT
MCRDLRQQGGCPRGTNCTFAHSQE RC3H2
YCSYFLKNMQCPKPD-CMYLHELG CNOT4